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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82774185_82774370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82774185 - 82774370

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGATGAT

U12 Branch Point Sequence:

GGTCCCGGGATG

Flanking Amino Acid:

VEPNEICVIQQGMRFSVEVF

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

51.7

0.04

1.4

45.5

47.5

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

41.9

-0.7

2.1

46.39

40.2

Associated Gene:

Gene:

HGD

Ensembl Gene ID:

ENSAPLG00000006938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019879

82768146 - 82785030

16885

ENSAPLT00000007234

82764180 - 82785030

20851