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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82774471_82776419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82774471 - 82776419

Intron Length:

1949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAACCATC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

CTTGCCCAAAGA

Flanking Amino Acid:

HFELPDLGPIGANGLANPRD

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.2

68.8

42.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

91.3

0.93

0.6

88.1

21.7

Minor 5ss

49.6

-0

2.6

66.5

Minor BPS

-0.4

2.3

59.22

46.6

Associated Gene:

Gene:

HGD

Ensembl Gene ID:

ENSAPLG00000006938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019879

82768146 - 82785030

16885

ENSAPLT00000007234

82764180 - 82785030

20851