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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82778349_82779882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82778349 - 82779882

Intron Length:

1534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTACGTCTA

5'SS Class:

major

3'SS Sequence:

ATGCCTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TCTTCTCTATGC

Flanking Amino Acid:

NNTFRPPYYHRNCMSEFMGL

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

63.2

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

71.6

0.49

0.9

65.1

35.7

Minor 5ss

38.9

-1.2

3.2

55.1

43.2

Minor BPS

46.6

-0.2

2.1

62.27

43.6

Associated Gene:

Gene:

HGD

Ensembl Gene ID:

ENSAPLG00000006938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019879

82768146 - 82785030

16885

ENSAPLT00000007234

82764180 - 82785030

20851