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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82780065_82780436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82780065 - 82780436

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAC

U12 Branch Point Sequence:

CTTGCCCTAATC

Flanking Amino Acid:

EPERVAEGTMAFMFESSLSM

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

67.4

0.43

73.2

28.9

Major PPT

70.9

0.47

0.9

63.6

38.2

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

59.6

0.28

1.8

70.63

41.3

Associated Gene:

Gene:

HGD

Ensembl Gene ID:

ENSAPLG00000006938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019879

82768146 - 82785030

16885

ENSAPLT00000007234

82764180 - 82785030

20851