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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82780565_82784810_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82780565 - 82784810

Intron Length:

4246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCACTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTCACTTGACA

Flanking Amino Acid:

PLKSHFNPNRSQVPFLRRVL

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

76.5

0.6

72.5

37.4

Minor 5ss

-2.2

3.2

45.7

Minor BPS

71.3

0.66

1.5

81.59

32.7

Associated Gene:

Gene:

HGD

Ensembl Gene ID:

ENSAPLG00000006938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019879

82768146 - 82785030

16885

ENSAPLT00000007234

82764180 - 82785030

20851