Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_82786153_82786405_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82786153 - 82786405

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

CCTTTTCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAG

U12 Branch Point Sequence:

TTGTCCTTTTCT

Flanking Amino Acid:

LNSPNPPTVIEDPALLRWVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

38.3

Major BPS

45.9

-0.2

1.7

42.8

49.4

Major PPT

84.4

0.77

0.7

79.9

25.4

Minor 5ss

33.4

-1.9

3.4

46.1

43.6

Minor BPS

47.7

-0.1

3.6

Associated Gene:

Gene:

NDUFB4

Ensembl Gene ID:

ENSAPLG00000017845

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033671

82784323 - 82786606

2284