Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_82847233_82847381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82847233 - 82847381

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACT

5'SS Class:

major

3'SS Sequence:

TGTTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCAGAA

U12 Branch Point Sequence:

CTGTGCAGAACG

Flanking Amino Acid:

YVDQETNKLLRGLCVDALIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

71.4

40.3

Major BPS

49.9

-0

1.1

46.7

38.9

Major PPT

87.9

0.85

0.7

85.4

29.3

Minor 5ss

35.2

-1.7

3.2

Minor BPS

44.6

-0.5

2.2

52.97

47.3

Associated Gene:

Gene:

FSTL1

Ensembl Gene ID:

ENSAPLG00000027059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044824

82846091 - 82851724

5634

ENSAPLT00000018023

82846091 - 82851724

5634