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Intron Name: Anas_platyrhynchos_platyrhynchos_1_82847495_82848660_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
82847495 - 82848660

Intron Length:
1166

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAGGAATT

5'SS Class:
major

3'SS Sequence:
TGTGCCTCTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTCAC

U12 Branch Point Sequence:
TATCTCACAACC

Flanking Amino Acid:
LSPSFNPPEKKCALEDETYE

Intron Amino Acid Position:
100

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1
78.3
36.2

Major BPS
76.2
0.65
0.9
77.4
26.5

Major PPT
76.1
0.59
0.9
66.2
40.7

Minor 5ss
39.7
-1.2
3.4
57.9
40.8

Minor BPS
50.2
-0
1.8
66.56
38.2

Associated Gene:

Gene:
FSTL1

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

82846091 - 82851724
5634

82846091 - 82851724
5634