Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_82965418_82965753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82965418 - 82965753

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATAAGA

5'SS Class:

major

3'SS Sequence:

TCTTGCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTATTTTAATT

Flanking Amino Acid:

MLGSGDKDGSKVTT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

66.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.8

0.69

0.8

72.6

37.5

Minor 5ss

33.1

-1.9

2.9

41.4

Minor BPS

70.3

0.71

1.2

80.77

35.1

Associated Gene:

Gene:

GSK3B

Ensembl Gene ID:

ENSAPLG00000007990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019455

82965314 - 83045021

79708