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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83055071_83055154_R


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
3UTR

Intron Coordinates:
83055071 - 83055154

Intron Length:
84

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTCTC

5'SS Class:
strong_major

3'SS Sequence:
TTTTTTTTTACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTATAT

U12 Branch Point Sequence:
TTTTTTTTTACA

Flanking Amino Acid:
3UTR

Intron Amino Acid Position:
3UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.5
0.98
0.8
81.3
32.8

Major BPS
70.4
0.51
1
67.1
39.4

Major PPT
98.8
1.1
0.5
95.2
16.3

Minor 5ss
33.3
-1.9
3
43.8
43.9

Minor BPS
71.2
0.66
1.5
82.45
31.9

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

83053979 - 83085062
31084