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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83104933_83106722_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83104933 - 83106722

Intron Length:

1790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAG

U12 Branch Point Sequence:

TGTGGTCTAAGC

Flanking Amino Acid:

IDRLSLLLSGRVRVSQDGQF

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

77.9

31.9

Major BPS

52.8

0.07

1.7

63.6

42.5

Major PPT

79.1

0.66

0.8

31.9

Minor 5ss

30.5

-2.2

3.5

41.8

45.1

Minor BPS

41.8

-0.6

2.3

55.02

43.5

Associated Gene:

Gene:

POPDC2

Ensembl Gene ID:

ENSAPLG00000019599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028767

83104442 - 83109436

4995