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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83106832_83108916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83106832 - 83108916

Intron Length:

2085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

TGGGGCTCACTC

Flanking Amino Acid:

LRPSEEGTFQVTLTAETDCS

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

71.3

37.2

Major BPS

52.1

0.05

1.3

41.8

Major PPT

72.6

0.51

0.8

65.1

30.7

Minor 5ss

-2.1

3.3

42.6

44.4

Minor BPS

39.9

-0.7

2.1

46.54

43.2

Associated Gene:

Gene:

POPDC2

Ensembl Gene ID:

ENSAPLG00000019599

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028767

83104442 - 83109436

4995