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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83144846_83145511_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83144846 - 83145511

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTACCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTCTGTTTACCT

Flanking Amino Acid:

NGGRPGNDNVAASVQSSDTV

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

71.4

0.53

1.1

63.4

Major PPT

81.2

0.7

0.8

74.8

35.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

57.2

0.31

2.1

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029608

83134116 - 83145738

11623

ENSAPLT00000028873

83137102 - 83145738

8637

ENSAPLT00000019463

83134133 - 83145738

11606

ENSAPLT00000011717

83134133 - 83146006

11874

ENSAPLT00000030263

83134116 - 83145738

11623