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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83210885_83211243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83210885 - 83211243

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

ACGCTCTCAATC

Flanking Amino Acid:

VMEEEPNKDNLYLGIVLAAV

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

83.2

30.8

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

75.1

0.57

0.8

69.7

31.1

Minor 5ss

36.4

-1.5

2.7

41.6

38.3

Minor BPS

49.3

-0

1.5

53.79

38.4

Associated Gene:

Gene:

ATP1A1

Ensembl Gene ID:

ENSAPLG00000011285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011885

83196079 - 83220297

24219