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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83213821_83219800_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83213821 - 83219800

Intron Length:

5980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

TCTTCTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TGTTTCTTAACA

Flanking Amino Acid:

ARRRPAPWARGLEETSMSLL

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

57.5

42.3

Major BPS

82.2

0.8

71.9

35.8

Major PPT

85.2

0.79

0.6

81.1

Minor 5ss

30.8

-2.2

3.3

32.5

42.6

Minor BPS

85.7

1.12

0.9

87.92

29.1

Associated Gene:

Gene:

ATP1A1

Ensembl Gene ID:

ENSAPLG00000011285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011885

83196079 - 83220297

24219