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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83348364_83348590_F

Intron Information:

Intron Rank:

123510

Intron Class:

major

Intron Phase:

Intron Coordinates:

83348364 - 83348590

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

TCTTCTTTGAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

80.6

0.69

82.7

26.3

Minor 5ss

38.7

-1.3

2.8

49.1

46.7

Minor BPS

64.6

0.32

1.5

67.24

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016601

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034035

83348285 - 83364758

16474