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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83414609_83416255_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83414609 - 83416255

Intron Length:

1647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGCACA

5'SS Class:

major

3'SS Sequence:

TTTGTCGTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

ATGATATCAAAT

Flanking Amino Acid:

TDVLVEFLLDLLEDPVEIIN

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

73.6

Major BPS

71.6

0.54

33.1

Major PPT

0.52

1.1

69.4

41.7

Minor 5ss

42.1

-0.9

2.8

54.7

42.4

Minor BPS

45.1

-0.2

1.8

61.97

41.3

Associated Gene:

Gene:

CASQ2

Ensembl Gene ID:

ENSAPLG00000011267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011761

83401633 - 83427980

26348