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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83416938_83417757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83416938 - 83417757

Intron Length:

820

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTCAC

U12 Branch Point Sequence:

TGCCCTGCAACA

Flanking Amino Acid:

IKFFATFDKGVAKKLGLKMN

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.2

39.9

Major BPS

59.5

0.24

1.2

63.3

35.6

Major PPT

63.5

0.3

57.7

37.4

Minor 5ss

43.5

-0.7

2.9

52.9

44.1

Minor BPS

45.2

-0.3

2.1

57.58

41.9

Associated Gene:

Gene:

CASQ2

Ensembl Gene ID:

ENSAPLG00000011267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011761

83401633 - 83427980

26348