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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83423377_83423896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83423377 - 83423896

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGC

5'SS Class:

major

3'SS Sequence:

TCTGTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TCTTCTGTCATT

Flanking Amino Acid:

IVAFAEEDDPDGFEFLEILK

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

65.2

40.3

Major BPS

72.5

0.56

1.2

39.9

Major PPT

81.1

0.7

0.9

77.9

35.2

Minor 5ss

29.4

-2.4

3.5

41.3

45.4

Minor BPS

2.4

74.65

43.4

Associated Gene:

Gene:

CASQ2

Ensembl Gene ID:

ENSAPLG00000011267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011761

83401633 - 83427980

26348