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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83441016_83441382_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83441016 - 83441382

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGAGC

5'SS Class:

major

3'SS Sequence:

CTTTTCTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

CTAATGTGATCC

Flanking Amino Acid:

FCITNNMTPKAFLERYLSPG

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.2

67.8

43.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

77.7

0.62

0.9

73.4

37.1

Minor 5ss

38.2

-1.3

3.2

52.1

44.7

Minor BPS

39.3

-0.8

2.2

48.16

41.5

Associated Gene:

Gene:

VANGL1

Ensembl Gene ID:

ENSAPLG00000011029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044910

83439755 - 83466986

27232

ENSAPLT00000011488

83439171 - 83465238

26068