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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8346944_8347100_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8346944 - 8347100

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGCGTGAG

5'SS Class:

weak_major

3'SS Sequence:

CTCCGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTTAC

U12 Branch Point Sequence:

CACCTGTTACCT

Flanking Amino Acid:

GGCLFFRPAACCLKFPGGAR

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.2

52.4

40.6

Major BPS

59.1

0.23

1.2

52.7

42.9

Major PPT

70.2

0.46

0.8

60.9

35.2

Minor 5ss

27.5

-2.6

3.3

Minor BPS

43.3

-0.4

2.2

57.35

45.5

Associated Gene:

Gene:

SEMA3A

Ensembl Gene ID:

ENSAPLG00000012883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046379

8346550 - 8515401

168852