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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83479179_83479842_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

83479179 - 83479842

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

CACTTTTTATTAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTGACAC

U12 Branch Point Sequence:

ATTTCCTTGACA

Flanking Amino Acid:

YLAARGIPTLIYYFPRNKGF

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

57.7

0.19

1.2

66.7

Major PPT

73.6

0.53

0.9

73.9

35.1

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

86.9

1.16

0.9

89.12

26.1

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766