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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83479952_83480196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83479952 - 83480196

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCACTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

TTGTCCTAAAGA

Flanking Amino Acid:

KIYFAAKKRNASVHLPRIGY

Intron Amino Acid Position:

737

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

72.7

0.57

72.1

31.1

Major PPT

76.3

0.59

0.8

73.3

31.3

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

0.37

74.81

43.1

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010457

83479100 - 83499865

20766

ENSAPLT00000042644

83479100 - 83500729

21630