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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83480640_83481372_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83480640 - 83481372

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTGGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATTAT

U12 Branch Point Sequence:

GTTTTCTGGACA

Flanking Amino Acid:

KVYEMAGKMKDLHLGGTLLF

Intron Amino Acid Position:

675

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

69.6

0.49

1.2

60.1

46.3

Major PPT

71.7

0.49

1.1

68.6

42.1

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

66.4

0.51

1.4

75.68

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766