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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83481472_83482072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83481472 - 83482072

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGGGACTT

5'SS Class:

major

3'SS Sequence:

CATTGCGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AGTTTCTAAAAG

Flanking Amino Acid:

EEDAIIVHCLDDSGRWGRGG

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

71.5

40.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.41

58.3

42.8

Minor 5ss

31.1

-2.2

3.5

46.9

48.4

Minor BPS

52.3

-0

1.8

59.46

42.1

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766