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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83482766_83483107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83482766 - 83483107

Intron Length:

342

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGCAA

5'SS Class:

major

3'SS Sequence:

ATACTTTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTGAGGTTAACA

Flanking Amino Acid:

EGRALRNKTNALLSGLREQS

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

67.8

38.8

Major BPS

0.52

1.1

77.7

35.3

Major PPT

78.7

0.65

0.9

70.2

40.5

Minor 5ss

32.5

-2

3.4

42.9

44.4

Minor BPS

48.7

-0.1

2.4

67.7

44.7

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766