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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83484692_83485774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83484692 - 83485774

Intron Length:

1083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATAG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GATATTTTAATA

Flanking Amino Acid:

PKPQGAADLQLSEILKFGLD

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.7

0.51

1.1

73.5

34.9

Minor 5ss

36.6

-1.5

3.1

46.6

48.7

Minor BPS

62.6

0.39

1.2

65.49

34.7

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010457

83479100 - 83499865

20766

ENSAPLT00000042644

83479100 - 83500729

21630