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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83488047_83489104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83488047 - 83489104

Intron Length:

1058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCGTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

ATTTCAGAAACA

Flanking Amino Acid:

DILQDYMDYRGYSYERLDGS

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.8

35.8

Major BPS

62.2

0.3

1.1

68.9

Major PPT

68.6

0.42

1.2

75.9

38.3

Minor 5ss

45.5

-0.5

3.1

65.3

46.1

Minor BPS

47.7

-0.1

2.5

70.86

41.2

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766