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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83489179_83490519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83489179 - 83490519

Intron Length:

1341

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTCAT

5'SS Class:

major

3'SS Sequence:

ATTCTTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

ATACGTTGAAGC

Flanking Amino Acid:

LDKLLSFLYAGGHRVLLFSQ

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

70.6

41.3

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

85.9

0.81

0.8

77.7

36.1

Minor 5ss

41.5

-0.9

2.8

46.3

Minor BPS

42.8

-0.5

51.85

39.1

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766