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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83490617_83491255_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83490617 - 83491255

Intron Length:

639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TACCTCTGAAAC

Flanking Amino Acid:

KCVAHPYLFNGVEPEPFEIG

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.3

32.8

Major BPS

69.8

0.49

37.5

Major PPT

84.4

0.77

0.8

76.5

37.6

Minor 5ss

33.3

-1.9

2.9

41.3

44.8

Minor BPS

50.4

-0

1.5

59.19

39.1

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766