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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83491349_83492449_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83491349 - 83492449

Intron Length:

1101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTGCTCT

Flanking Amino Acid:

YYKAILMKDLDAFESETGKK

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.4

32.7

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

93.1

0.97

0.7

92.3

26.6

Minor 5ss

-2.1

3.1

39.6

46.4

Minor BPS

45.2

-0.2

3.7

84.91

41.5

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766