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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83492606_83492923_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83492606 - 83492923

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTATTCTGAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TTATGCTTAATT

Flanking Amino Acid:

YQAIEKESETAKELHNLLQP

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

88.9

24.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

68.8

0.42

66.6

39.3

Minor 5ss

37.5

-1.4

2.8

51.2

45.3

Minor BPS

74.3

0.84

1.7

88.75

36.3

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766