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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83493087_83494375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83493087 - 83494375

Intron Length:

1289

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

ATCTCCTAATCA

Flanking Amino Acid:

SSLLYKTLSEFSVGFSVLLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

80.4

0.76

80.3

31.8

Major PPT

83.7

0.76

0.9

81.2

36.5

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

56.3

0.19

69.36

43.2

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766