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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83494458_83495994_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83494458 - 83495994

Intron Length:

1537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTCTG

5'SS Class:

major

3'SS Sequence:

TGTTTGTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

TTGCACCTAACT

Flanking Amino Acid:

ICLKDAAFLKLFNWAALVVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

62.1

43.9

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

81.4

0.71

0.9

75.8

38.1

Minor 5ss

35.3

-1.7

3.1

51.2

45.1

Minor BPS

58.1

0.33

1.9

79.73

41.5

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766