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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83496027_83497498_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83496027 - 83497498

Intron Length:

1472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATGGT

5'SS Class:

major

3'SS Sequence:

CCTTTCGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAA

U12 Branch Point Sequence:

TAAGTCCTAAGT

Flanking Amino Acid:

HFHALLTTYEICLKDAAFLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

69.7

41.2

Major BPS

65.6

0.39

0.9

55.7

32.1

Major PPT

81.9

0.72

0.8

76.1

32.4

Minor 5ss

32.7

-2

3.5

49.7

46.5

Minor BPS

47.4

-0.1

66.21

44.1

Associated Gene:

Gene:

CHD1L

Ensembl Gene ID:

ENSAPLG00000009976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042644

83479100 - 83500729

21630

ENSAPLT00000010457

83479100 - 83499865

20766