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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83502594_83503853_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83502594 - 83503853

Intron Length:

1260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCAAA

U12 Branch Point Sequence:

AGCTTGCAAACT

Flanking Amino Acid:

GQFLLLPLLVRMHNLSLMRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

52.6

0.06

1.4

62.7

41.6

Major PPT

86.3

0.82

0.7

84.1

23.9

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

40.4

-0.6

2.4

58.92

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046427

83500841 - 83514029

13189

ENSAPLT00000030602

83500841 - 83514029

13189

ENSAPLT00000025520

83500841 - 83515029

14189