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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83516984_83517470_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83516984 - 83517470

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAT|GCAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TGCTTTTTACCT

Flanking Amino Acid:

PSDVSHARFYFLFHRPLRLL

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.2

91.6

21.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

79.5

0.66

0.8

74.1

31.1

Minor 5ss

32.4

-2

50.4

39.3

Minor BPS

61.4

0.44

1.6

75.46

41.9

Associated Gene:

Gene:

TMEM39A

Ensembl Gene ID:

ENSAPLG00000009675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043926

83516750 - 83528564

11815

ENSAPLT00000010092

83516750 - 83524477

7728