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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83517592_83518123_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83517592 - 83518123

Intron Length:

532

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CTGATGCTAACG

Flanking Amino Acid:

HGSYSNAPQHIWSENTIWPQ

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

78.2

36.4

Major BPS

0.72

38.9

Major PPT

90.6

0.91

0.6

85.8

21.3

Minor 5ss

38.7

-1.3

3.4

53.8

43.6

Minor BPS

41.7

-0.7

2.3

47.85

45.5

Associated Gene:

Gene:

TMEM39A

Ensembl Gene ID:

ENSAPLG00000009675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010092

83516750 - 83524477

7728

ENSAPLT00000043926

83516750 - 83528564

11815