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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83518312_83519120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83518312 - 83519120

Intron Length:

809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTCTT

5'SS Class:

major

3'SS Sequence:

GCTCTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

GCGTGCCAAGTT

Flanking Amino Acid:

VAFLPLCFVKSTQYYDMRWS

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.2

72.7

44.5

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

82.4

0.73

0.8

76.3

32.2

Minor 5ss

44.3

-0.6

3.3

67.2

43.9

Minor BPS

-0.9

2.2

48.62

44.9

Associated Gene:

Gene:

TMEM39A

Ensembl Gene ID:

ENSAPLG00000009675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043926

83516750 - 83528564

11815

ENSAPLT00000010092

83516750 - 83524477

7728