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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83519470_83519730_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83519470 - 83519730

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

GTAATTTCATCC

Flanking Amino Acid:

SVLNLLFLGYPFGVYVPLCC

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.4

1.3

68.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

0.83

0.7

81.7

23.1

Minor 5ss

32.4

-2

2.7

41.3

38.3

Minor BPS

44.8

-0.4

1.7

52.63

38.6

Associated Gene:

Gene:

TMEM39A

Ensembl Gene ID:

ENSAPLG00000009675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043926

83516750 - 83528564

11815

ENSAPLT00000010092

83516750 - 83524477

7728