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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83519874_83521257_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

83519874 - 83521257

Intron Length:

1384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTCTATTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TCTTCTCTATTT

Flanking Amino Acid:

RRLVWALISEASQVGATSVI

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

78.8

38.3

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

0.81

0.7

80.7

Minor 5ss

68.6

0.63

2.3

82.3

37.5

Minor BPS

54.3

0.21

1.9

75.99

41.5

Associated Gene:

Gene:

TMEM39A

Ensembl Gene ID:

ENSAPLG00000009675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043926

83516750 - 83528564

11815

ENSAPLT00000010092

83516750 - 83524477

7728