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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83521342_83522740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83521342 - 83522740

Intron Length:

1399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

TGGTGAAGACCT

Flanking Amino Acid:

YNHPASCTSLNFHLIDYHLA

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.7

31.1

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

87.5

0.84

0.6

85.4

21.9

Minor 5ss

36.2

-1.6

2.8

41.9

38.9

Minor BPS

36.3

-0.9

2.3

55.86

45.5

Associated Gene:

Gene:

TMEM39A

Ensembl Gene ID:

ENSAPLG00000009675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043926

83516750 - 83528564

11815

ENSAPLT00000010092

83516750 - 83524477

7728