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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83545862_83558711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

83545862 - 83558711

Intron Length:

12850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TAGAAACTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

37.3

Major BPS

0.45

0.9

67.6

25.3

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

35.6

-1.6

3.5

48.7

47.8

Minor BPS

45.3

-0.2

2.1

65.64

43.7

Associated Gene:

Gene:

B4GALT4

Ensembl Gene ID:

ENSAPLG00000009388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042108

83545404 - 83568501

23098