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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83575036_83575919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83575036 - 83575919

Intron Length:

884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

GGTGAAGCAACT

Flanking Amino Acid:

LSYRIYLIQQVGNGTFNRAK

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

38.6

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

91.6

0.94

0.7

84.6

Minor 5ss

41.4

-1

3.1

56.1

Minor BPS

37.2

-0.8

2.4

56.31

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043433

83570911 - 83582867

11957

ENSAPLT00000009635

83570210 - 83584678

14469