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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83709198_83710941_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
83709198 - 83710941

Intron Length:
1744

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACAGTAG

5'SS Class:
major

3'SS Sequence:
TTTCCTGGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAATAAT

U12 Branch Point Sequence:
TACTAGTAAACC

Flanking Amino Acid:
LALVWAPNLLRSKEIEAVGC

Intron Amino Acid Position:
19

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.2
0.48
1.1
60.1
41.3

Major BPS
67.7
0.44
1.1
67.9
34.4

Major PPT
77.3
0.61
1
72.7
37.5

Minor 5ss
34.4
-1.8
3.5
46
49.3

Minor BPS
45.2
-0.3
2.4
60.15
44.8

Associated Gene:

Gene:
ARHGAP31

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

83709090 - 83724594
15505

83709090 - 83722112
13023