Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_83711088_83712422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83711088 - 83712422

Intron Length:

1335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACAACC

5'SS Class:

major

3'SS Sequence:

TCTTGCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGGAATGTACTT

Flanking Amino Acid:

NRKASSAENIENAPIVRNLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

63.8

40.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

0.83

0.7

84.4

30.5

Minor 5ss

40.8

-1

2.9

54.8

42.1

Minor BPS

38.7

-0.7

2.2

53.65

42.3

Associated Gene:

Gene:

ARHGAP31

Ensembl Gene ID:

ENSAPLG00000009089

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045846

83709090 - 83724594

15505

ENSAPLT00000009451

83709090 - 83722112

13023