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Intron Name: Anas_platyrhynchos_platyrhynchos_1_83734905_83735789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83734905 - 83735789

Intron Length:

885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGTTT

5'SS Class:

strong_major

3'SS Sequence:

GGTTGTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTTGTCTTACAG

Flanking Amino Acid:

LGVPGFFKSNGCYAAISGPM

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

81.6

32.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.8

0.6

68.8

42.1

Minor 5ss

45.1

-0.5

3.4

41.9

Minor BPS

48.6

-0.2

1.9

56.62

44.8

Associated Gene:

Gene:

UPK1B

Ensembl Gene ID:

ENSAPLG00000008825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009189

83734165 - 83739594

5430