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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8398613_8401456_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8398613 - 8401456

Intron Length:

2844

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTTTA

5'SS Class:

major

3'SS Sequence:

TCTGTGTCTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

CTTGAAATAACA

Flanking Amino Acid:

NLVNIKEYQKIVWPVSHSRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

75.2

37.7

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

76.1

0.59

0.9

73.6

Minor 5ss

48.2

-0.2

2.8

67.3

43.8

Minor BPS

45.8

-0.3

2.1

62.55

43.1

Associated Gene:

Gene:

SEMA3A

Ensembl Gene ID:

ENSAPLG00000012883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046379

8346550 - 8515401

168852

ENSAPLT00000013989

8346264 - 8515401

169138

ENSAPLT00000013411

8271191 - 8515401

244211