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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8401520_8418007_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8401520 - 8418007

Intron Length:

16488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGCAATTTATTT

Flanking Amino Acid:

ECKWAGKDILRECANFIKVL

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.8

82.4

29.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

92.5

0.96

0.6

88.1

21.6

Minor 5ss

36.2

-1.6

2.6

40.7

39.2

Minor BPS

-0.1

1.8

62.03

42.3

Associated Gene:

Gene:

SEMA3A

Ensembl Gene ID:

ENSAPLG00000012883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046379

8346550 - 8515401

168852

ENSAPLT00000013989

8346264 - 8515401

169138

ENSAPLT00000013411

8271191 - 8515401

244211