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Intron Name: Anas_platyrhynchos_platyrhynchos_1_8418128_8450252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8418128 - 8450252

Intron Length:

32125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTAT

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTCCCCCCCACA

Flanking Amino Acid:

TYIEVGSHPEDNIFRMEDSH

Intron Amino Acid Position:

152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

86.4

23.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.1

0.57

0.7

68.7

25.1

Minor 5ss

41.2

-1

57.8

46.8

Minor BPS

44.9

-0.4

2.2

61.96

43.8

Associated Gene:

Gene:

SEMA3A

Ensembl Gene ID:

ENSAPLG00000012883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046379

8346550 - 8515401

168852

ENSAPLT00000013989

8346264 - 8515401

169138

ENSAPLT00000013411

8271191 - 8515401

244211